blachlylab/mucor repository overview

⁠mucor: mutation correlation

http://biorxiv.org/content/early/2015/07/19/022780⁠ https://github.com/blachlylab/mucor⁠

Installation:

docker pull blachlylab/mucor

Usage:

docker run -it -v /your/input/datadir:/home/user1/input blachlylab/mucor

This will drop you into a command prompt as 'user1' in /home/user1, with your input data mounted as ~/input, and a persistent data volume at ~/output

Run mucor as usual: mucor_config.py ... (be sure to specify the persistent volume ~/output as your output directory or your results could be lost!) mucor.py yourconfig.json

To retrieve your data: Exit the running container docker cp [containerid]:/home/user1/output ./destination