blcdsdockerregistry/delly repository overview

⁠docker-delly

Repository for the Boutros Lab Delly Dockerfile, "an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data."

The image is located in the Boutros Lab Docker Hub repo: https://hub.docker.com/repository/docker/blcdsdockerregistry/delly⁠

⁠Documentation

Delly GitHub repository here⁠

⁠Version

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⁠References

1. Tobias Rausch, Thomas Zichner, Andreas Schlattl, Adrian M. Stuetz, Vladimir Benes, Jan O. Korbel. DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics. 2012 Sep 15;28(18):i333-i339. https://doi.org/10.1093/bioinformatics/bts378⁠

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⁠License

Author: 'Timothy Sanders', 'Yu Pan', 'Mohammed Faizal Eeman Mootor'

docker-delly is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.

docker-delly can be used to create a docker instance to use the Delly tool.

Copyright (C) 2021-2022 University of California Los Angeles ("Boutros Lab") All rights reserved.

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.