A learning-based framework for drug annotation and repositioning based on transcriptional profile
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Usage:
Pull image from dockerhub:
docker pull bm2lab/drsim
Run the image in interactive mode with your dataset:
docker run -it bm2lab/drsim
Change directory into /home/src:
cd /home/src
DrSim can be applied for :
Drug annotation
python DrugAno.py --help
python DrugAno.py -ref DrugAnoRef.h5 -query query.tsv
Drug repositionin
python DrugRep.py --help
python DrugRep.py -ref DrugRepRef.h5 -query query.tsv
For more information about DrSim, please refer to
DrSim Github repository (https://github.com/bm2-lab/DrSim)
Content type
Image
Digest
Size
1.3 GB
Last updated
over 4 years ago
docker pull bm2lab/drsim