bskjerven/scpipe repository overview

This image uses Bioconductor (https://bioconductor.org⁠) to install the single cell pipeline scPipe:

• https://github.com/LuyiTian/scPipe⁠
• https://bioconductor.org/packages/release/bioc/html/scPipe.html⁠

scPipe provides a pipeline for barcode demultiplexing, transcript mapping, and quality control of raw sequence data. Further downstream analysis methods such as normalisation and visualisation are also available.