cbgr/jaspar_downstream_wordclouds repository overview

⁠Container environment for JASPAR wordclouds analysis

2023 July 27

⁠About

This container includes the software to generate wordclouds for JASPAR profiles. The scripts of the wordcloud workflow were taken from this repository⁠. The last commit ID of this repository that was used in the container: dd74a37.

⁠How to run the code?

The tag is a container that is used in a Snakemake pipeline to generate wordclouds for JASPAR database. See this repository⁠ for more information.

The Dockerfile used to build the latest version can be found at https://bitbucket.org/CBGR/jaspar_downstream/src/main/new_structure/jaspardownstream/external_tools/wordclouds/docker/⁠

⁠Contact

In case you have any questions related to this pipeline, please contact the following persons: