cbgr/jaspar_tfbs_extraction repository overview

⁠JASPAR TFBS extraction tool

2023 April 21

⁠About

The JASPAR TFBS extraction tool allows easy retrieval of JASPAR TFBSs within an input set of genomic regions provided as a BED file. The tool also allows filtering the extraction results to keep only TFs/matrix IDs of interest as well as TFBSs with a minimal score.

⁠How to run the code?

This container has all necessary software to run the tool. For more details on how to run the tool please go to its repository⁠.

⁠Contact

If you have any issues or doubts, please contact one of the following people: