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cford38/alphafold3

By cford38

•Updated almost 2 years ago

Docker image for the open-source version AlphaFold3 without required databases or weights.

Image
5

4.8K

cford38/alphafold3 repository overview

⁠AlphaFold3 in Docker

Please refer to Google Deepmind's installation instructions⁠ to get the required databases and the model weights. They are not included in this image.

⁠Get the Image

docker pull cford38/alphafold3

⁠Run the Image

docker run -it \
    --volume $HOME/af_input:/root/af_input \
    --volume $HOME/af_output:/root/af_output \
    --volume <MODEL_PARAMETERS_DIR>:/root/models \
    --volume <DATABASES_DIR>:/root/public_databases \
    --gpus all \
    alphafold3 \
    python run_alphafold.py \
    --json_path=/root/af_input/fold_input.json \
    --model_dir=/root/models \
    --output_dir=/root/af_output

Tag summary

Content type

Image

Digest

sha256:4f5075f72…

Size

5 GB

Last updated

almost 2 years ago

docker pull cford38/alphafold3