busco, with augustus, blast+, hmmer and Rscript.
869
busco license: MIT
See the container github-site for further usage documentation.
To start a container:
docker run -it comics/busco bash
To process data sitting in your current working directory:
docker run -it -v $PWD:$PWD comics/busco bash -c "cd $PWD ; run_BUSCO.py [busco options]"
Or as an example:
docker run -it -v $PWD:$PWD comics/busco bash -c "cd $PWD ; run_BUSCO.py -i target.fa -o SAMPLE -l example -m genome -c 1 -sp fly"
Content type
Image
Digest
Size
912.1 MB
Last updated
over 8 years ago
docker pull comics/busco