csiva2022/polishclr repository overview

⁠Polish CLR

Start up docker and pull the csiva2022/polishclr:latest image.

docker pull csiva2022/polishclr:latest

⁠Option 1

docker run -it csiva2022/polishclr:latest
nextflow run isugifNF/polishCLR -r main
--check_software

⁠Option 2

nextflow run isugifNF/polishCLR -r main
--check_software
-profile docker

⁠Option 3

nextflow run isugifNF/polishCLR -r main
--check_software
--with-docker csiva2022/polishclr:latest Run the polishCLR pipeline with an added -with-docker csiva2022/polishclr:latest parameter. See nextflow docker run documentation for more information.