cwarden45/hpv-project repository overview

Everything in cwarden45/genomics-base plus:

biopython (v1.67) cutadapt (v1.13, set in $PATH as cutadapt) plink (v1.9, set in $PATH as plink) ADMIXTURE (v1.3.0, set in $PATH as admixture) nano (v2.5.3-2) reshape R package (v0.8.6) png R package (v.0.1-7) limma R package (v.3.30.13) edgeR R package (v3.16.5) gplots R package (v3.0.1) heatmap.3.R (code downloaded as /opt/heatmap.3.R, downloaded from https://github.com/obigriffith/biostar-tutorials/blob/master/Heatmaps/heatmap.3.R⁠ on 6/21/2017)

R packages installed in /usr/local/lib/R/site-library