dcanumn/osprey-bids repository overview

⁠Osprey-BIDS

This project is a derivative of Osprey⁠, an open-source tool designed to facilitate the use of Magnetic Resonance Spectroscopy (MRS) data in the Brain Imaging Data Structure (BIDS) format. This derivative tool extends the original functionalities to better facilitate automated processing of BIDS-formatted MRS data, and to allow localizer registration for aligning the MRS voxel high-resolution T1w/T2w images.

⁠Documentation

Comprehensive documentation for this derivative tool is available at Read the Docs⁠. All MRS modeling details are taken directly from the original Osprey tool, and that documentation⁠ source should be considered the most up to date description of MRS modeling methodology.

⁠Attribution

This project is based on Osprey⁠, which is licensed under the MIT License, and described in more detail in the following reference. We ask that any works that utilize this tool cite the original publication:

G Oeltzschner, HJ Zöllner, SCN Hui, M Mikkelsen, MG Saleh, S Tapper, RAE Edden. Osprey: Open-Source Processing, Reconstruction & Estimation of Magnetic Resonance Spectroscopy Data. J Neurosci Meth 343:108827 (2020).⁠

⁠License

This project is licensed under the MIT License. See the LICENSE file for details.

⁠DOI

Please see the ReadTheDocs page for documentation details: https://osprey-bids.readthedocs.io/en/latest/⁠