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duplexa/4dn-hic

By duplexa

•Updated over 7 years ago

Docker image for 4DNucleome Hi-C data processing pipeline

Image
0

50K+

duplexa/4dn-hic repository overview

The docker image contains software tools necessary for running the 4DN Hi-C data processing pipeline including but not limited to the following.

  • bwa
  • pairtools
  • pairix
  • cooler
  • juicer

The image also contains a set of bash scripts that serve as wrappers. All the relevant tools are in $PATH.

Source repo : https://github.com/4dn-dcic/docker-4dn-hic⁠

Tag summary

Content type

Image

Digest

Size

1.1 GB

Last updated

over 8 years ago

docker pull duplexa/4dn-hic