dxkb/stabilinnator-bvbrc repository overview

stabiliNNator BV-BRC

BV-BRC AppService integration for stabiliNNator protein stability prediction.

Extends dxkb/stabilinnator:latest-gpu with BV-BRC Perl runtime and workspace support.

Usage

⁠Native tools

docker run --rm -v $(pwd):/data dxkb/stabilinnator-bvbrc:latest-gpu
prolinnator --pdb-path /data/protein.pdb --output-path /data/output.pdb --device cpu

⁠BV-BRC App Service

docker run --rm dxkb/stabilinnator-bvbrc:latest-gpu
App-StabiliNNator --help

Includes

• BV-BRC Perl 5.40.2 runtime
• Workspace API support
• App-StabiliNNator.pl service script

Links

• https://github.com/CEPI-dxkb/stabiliNNatorApp⁠
• https://hub.docker.com/r/dxkb/stabilinnator⁠