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ebitraining/highthroughput

By ebitraining

•Updated almost 8 years ago

Docker Container for Analysis of High Throughput Sequencing Data training course

Image
0

1.1K

ebitraining/highthroughput repository overview

⁠Highthroughput

Docker Container for Analysis of High Throughput Sequencing Data training course

⁠To run the container for the first time with generic graphics:

xhost +
docker run -it -v /tmp/.X11-unix:/tmp/.X11-unix:rw --privileged -e DISPLAY=unix$DISPLAY \
-v $HOME/:/home/training/ --device /dev/dri --privileged --name highthroughput \
ebitraining/highthroughput:latest

⁠To run with Nvidia graphics, add the following option:

-v /usr/lib/nvidia-340:/usr/lib/nvidia-340 -v /usr/lib32/nvidia-340:/usr/lib32/nvidia-340

⁠To resume using an container:

docker exec -it highthroughput /bin/bash

⁠To build the container:

docker build -f ./Dockerfile -t highthroughput .
docker tag highthroughput ebitraining/highthroughput:latest
docker push ebitraining/highthroughput:latest

Tag summary

Content type

Image

Digest

Size

2.5 GB

Last updated

almost 8 years ago

docker pull ebitraining/highthroughput