OLD REPOSITORY PLEASE SEE UPDATED VERSION HERE: https://hub.docker.com/repository/docker/edwardslab/tedetective
Link to Github page: https://github.com/edwardslab-wustl/TE-detective
Be sure to add the following to your PATH
BLASTDIR=/usr/local/blast-2.2.26/bin
PATH=/opt/anaconda3/bin/:/usr/local/utils/:$BLASTDIR/:/usr/local/bwa:$PATH
Example data link: https://github.com/edwardslab-wustl/TE-detective/raw/main/example_data.tar.gz
Installed package locations:
Censor: /usr/local/censor-4.2.29/
BLAST: /usr/local/blast-2.2.26/
Anaconda: /opt/anaconda3/
Content type
Image
Digest
Size
3.9 GB
Last updated
over 4 years ago
docker pull edwardslab/te-detective