emmanuelgonzalez/psii_fluorescence_aggregation repository overview

⁠PSii Fluorescence Aggregation

⁠Inputs

⁠Outputs

⁠Arguments and Flags

• Positional Arguments:
  • CSV to Process: 'csv', nargs='+'
• Required Arguments:
  • Multithreshold json file: '-m', '--multithresh'
• Optional Arguments:
  • Output directory: '-od', '--outdir', default='fluorescence_aggregation_out'
  • Classes to detect: '-of', '--outfile', default='fluorescence_aggregation'

⁠Adapting the Script

⁠Example