erasche/webapollo2
GMOD's Apollo genome annotation software
1.4K
erasche/webapollo2 repository overview
Apollo
From the GMOD Wiki
WebApollo2 is a browser-based tool for visualisation and editing of sequence annotations. It is designed for distributed community annotation efforts, where numerous people may be working on the same sequences in geographically different locations; real-time updating keeps all users in sync during the editing process.
Running the Container
The container is publicly available as erasche/webapollo2. The recommended
method for launching the container is via docker-compose due to a dependency
on a postgres image.
webapollo2:
image: erasche/webapollo2
links:
- db
ports:
- "8080:8080"
environment:
WEBAPOLLO_DB_USERNAME: postgres
WEBAPOLLO_DB_PASSWORD: password
WEBAPOLLO_DB_DRIVER: "org.postgresql.Driver"
WEBAPOLLO_DB_DIALECT: "org.hibernate.dialect.PostgresPlusDialect"
WEBAPOLLO_DB_URI: "jdbc:postgresql://${DB_1_PORT_5432_TCP_ADDR}/postgres"
db:
image: postgres
environment:
POSTGRES_PASSWORD: password
There are a large number of environment variables that can be adjusted to suit your site's needs. These can be seen in the apollo-config.groovy file.
Tag summary
Content type
Image
Digest
sha256:2c808540a…
Size
1.2 GB
Last updated
over 10 years ago
docker pull erasche/webapollo2