eturkes/bag3-pathway-analysis repository overview

⁠BAG3 Pathway Analysis

⁠This analysis is a work-in-progress

Pathway Analysis of the BAG3 protein

In order to run and view the results of this analysis, the prerequisite data is required. Please contact me at [email protected]⁠ if you are interested. After obtaining the data, it should be unzipped and its directory moved to the project root and renamed as gdrive.

A Docker image for this project is available from DockerHub⁠. This is the recommended way to reproduce and explore the project.

To run all scripts and generate an HTML report in the results directory, just run:

docker-compose run all

To open RStudio, run:

docker-compose up rstudio

It will be available in your web browser at the address localhost:8788⁠.