flywheel/fsl-feat repository overview

⁠flywheel/fsl-feat

Build context for a Flywheel Gear⁠ to execute FSL's FEAT.

This Gear uses a simple .fsf file that performs basic preprocessing. This includes the following steps, all of which are optional (see manifest.json):

1. Initial Volume Removal (default 0 volumes)
2. Motion Correction (default YES)
3. Slice Timing Correction (default YES, must specify acquisition order)
4. Spatial Smoothing (default 5mmFWHM)
5. Intensity Normalization (default YES)
6. High-Pass Filtering (default 100s cutoff)
7. Brain extraction (default YES)
8. Registration to standard (default YES)
   • Registration to alternate templates is supported when a Standard Template is specified AND the Use alt template option is set to 1 (true).
9. Low_pass Filtering (default NO)