flywheel/pydeface repository overview

⁠pydeface-gear

A flywheel gear to remove facial structure from MRI images.

Leverages FSL⁠, Python 3⁠, NumPy⁠, NiBabel⁠, and Nipype⁠ to coregister a provided image to a template and removes facial features by removing the facial structure in accordance with the registration template and face mask. User may provide a template and face mask.

⁠Website

The source code of pydeface can be found at github⁠

⁠Usage Notes

⁠inputs

• infile (required): The NIfTI file to remove facial structure from
• template (optional): The optional template image that will be used as the registration target instead of the default.
• facemask (optional): The optional face mask image that will be used instead of the default.

⁠parameters

• cost: FSL-FLIRT cost function. "mutualinfo" default.
• nocleanup: Do not cleanup temporary files. On by default.
• verbose: Show additional status prints. On by default.