fnndsc/pl-adapt_object_mesh repository overview

⁠adapt_object_mesh

pl-adapt_object_mesh is a ChRIS⁠ ds plugin wrapper for adapt_object_mesh⁠, a polygonal mesh smoothing program from CIVET⁠. adapt_object_mesh implements Taubin smoothing. pl-adapt_object_mesh runs adapt_object_mesh on every .obj file in its input directory, writing outputs to an output directory, and printing logs to log files which are created next to the output surfaces.

⁠Installation

pl-adapt_object_mesh is a ChRIS⁠ plugin, meaning it can run from either within ChRIS or the command-line.

⁠Local Usage

To get started with local command-line usage, use Apptainer⁠ (a.k.a. Singularity) to run pl-adapt_object_mesh as a container. To print its available options, run:

apptainer exec docker://fnndsc/pl-adapt_object_mesh adapt_object_mesh_wrapper --help

⁠Example

singularity exec docker://fnndsc/pl-adapt_object_mesh:latest adapt_object_mesh_wrapper --iterations 50 incoming/ outgoing/