Generate a PDF report as part of the COVID-NET pipeline
10K+
.. image:: https://img.shields.io/github/license/FNNDSC/pl-pdfgeneration :target: https://github.com/FNNDSC/pl-pdfgeneration/blob/master/LICENSE :alt: License AGPL-3.0
.. image:: https://img.shields.io/docker/v/fnndsc/pl-covidnet-pdfgeneration?sort=semver :target: https://hub.docker.com/r/fnndsc/pl-covidnet-pdfgeneration :alt: Version
.. contents:: Table of Contents
Generate a simple PDF report for the results from
pl-covidnet <https://github.com/FNNDSC/pl-covidnet>_.
.. code::
[--imagefile]
required field, the name of the patient chest X-Ray image
[--patientId]
name to appear in report
.. code::
mkdir covidnet-in covidnet-out pdfgeneration-out
cp chest-scan.jpg covidnet-in
docker run --rm -u -u $(id -u):$(id -g) \
-v $PWD/covidnet-in:/incoming:ro -v $PWD/covidnet-out:/outgoing:rw \
fnndsc/pl-covidnet:0.2.0 covidnet \
--imagefile chest-scan.jpg /incoming /outgoing
docker run --rm -u -u $(id -u):$(id -g) \
-v $PWD/covidnet-out:/incoming:ro -v $PWD/pdfgeneration-out:/outgoing:rw \
fnndsc/pl-covidnet-pdfgeneration:0.2.0 pdfgeneration \
--imagefile chest-scan.jpg --patientId 12345678 /incoming /outgoing
Content type
Image
Digest
Size
186 MB
Last updated
over 5 years ago
docker pull fnndsc/pl-pdfgeneration