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gencorefacility/variant-calling-pipeline-gatk4

By gencorefacility

•Updated over 6 years ago

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gencorefacility/variant-calling-pipeline-gatk4 repository overview

⁠variant-calling-pipeline-gatk4

Variant Calling Pipeline Using GATK4 and Nextflow

This repo contains a Nextflow script for variant detection using GATK4. Full details including a description of the analysis and how to use the script: https://gencore.bio.nyu.edu/variant-calling-pipeline-gatk4/⁠

Overview of the workflow:

Workflow

Tag summary

Content type

Image

Digest

Size

1.1 GB

Last updated

over 6 years ago

docker pull gencorefacility/variant-calling-pipeline-gatk4