Variant Calling Pipeline Using GATK4 and Nextflow
This repo contains a Nextflow script for variant detection using GATK4. Full details including a description of the analysis and how to use the script: https://gencore.bio.nyu.edu/variant-calling-pipeline-gatk4/
Overview of the workflow:

Content type
Image
Digest
Size
1.1 GB
Last updated
over 6 years ago
docker pull gencorefacility/variant-calling-pipeline-gatk4