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hammerlab/mhcflurry-cloud

By hammerlab

•Updated about 10 years ago

MHCflurry model selection on google container engine

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hammerlab/mhcflurry-cloud repository overview

⁠mhcflurry-cloud

This module provides joblib⁠-enabled routines to train and test MHCflurry⁠ models.

⁠Python 3.4 only (when running with multiprocessing)

When using the multiprocessing backend for joblib (the default), the 'fork' mode causes a library we use to hang. We have to instead use the 'spawn' or 'forkserver' modes. See this note⁠ for more information.

⁠Running locally

Install the package and run tests. From the repo directory:

$ pip install -e .
$ nosetests .

Then try running the example notebook⁠.

⁠Running on google cloud

TODO

Tag summary

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Image

Digest

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803.6 MB

Last updated

about 10 years ago

docker pull hammerlab/mhcflurry-cloud