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henryburgess/cistarget

By henryburgess

•Updated over 2 years ago

Docker container for using the cisTarget tool.

Image
Data science
0

250

henryburgess/cistarget repository overview

⁠cisTarget

Docker container for the create_cisTarget_databases⁠ repository.

⁠Usage

  1. Start the job: bsub -R "rusage[mem=32GB]" -Is -q general-interactive -a 'docker(henryburgess/cistarget)' /bin/bash
  2. Activate the conda environment: conda activate create_cistarget_databases

⁠Notes

  • This container uses Miniconda3 with Python 3.10 and includes the cbust, liftOver, and bigWigAverageOverBed executables.
  • The container will start with the create_cistarget_databases conda environment active.
  • The create_cisTarget_databases repository can be found at ~/create_cisTarget_databases once the container is running.

Tag summary

Content type

Image

Digest

sha256:dcd27531a…

Size

1.2 GB

Last updated

over 2 years ago

docker pull henryburgess/cistarget