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henryburgess/tf-comb-notebook

By henryburgess

•Updated 11 months ago

Docker container for using the TF-COMB tool with Jupyter Notebook access.

Image
Data science
0

1.5K

henryburgess/tf-comb-notebook repository overview

⁠TF-COMB and Jupyter Notebook

This Docker container allows you to use TF-COMB⁠ with a Jupyter Notebook.

⁠Usage

  1. Export a port prior to running the job: export LSF_DOCKER_PORTS='8888:8888'

  2. Start the job: bsub -R 'gpuhost' -R "rusage[mem=32GB]" -n 16 -Is -q general-interactive -R 'select[port8888=1]' -a 'docker(henryburgess/tf-comb-notebook)' /bin/bash

  3. Run any setup prior to starting the Jupyter Notebook instance.

  4. Start a Jupyter Notebook instance: jupyter notebook --ip=0.0.0.0 --NotebookApp.allow_origin=* --port=8888

  5. Access the Jupyter Notebook instance via a web browser at the following URL: http://compute1-exec-nn.ris.wustl.edu:8888/?token=<48-character token>. The actual token is contained in the output from step 4.

Tag summary

Content type

Image

Digest

sha256:bad3ba582…

Size

1.2 GB

Last updated

11 months ago

docker pull henryburgess/tf-comb-notebook