iguigon/galaxy_docker_chipseq repository overview

The Galaxy Docker ChipSeq image contains a complete Galaxy installation with some tools useful for ChipSeq analysis.

• v1.0.0: deeptools, macs21, ceas, bedtools

• v2.0.0 : previous tools + Venn Diagram and peak2gene (Cistrome tools)

• v2.0.2 : fix a bug about access to data for CEAS

• v2.0.4 : fix a bug about bedtools update deepTools (v2.5.1) install MACS2 from iuc instead of MACS21 from pjbriggs add mm10 to the list of possible assemblies

• v2.0.5 : add wigToBigWig, faToTwoBit and bedGraphToBigWig

• v2.0.6 : install bedtools from source to have the latest version

• v2.0.7 : fix deeptools installation

• v2.0.8 : fix MACS2 installation

• v2.0.10: install matplotlib and upgrade numpy