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ikmb/virus-pipe

Sponsored OSS

By Kiel University

•Updated over 3 years ago

Image
0

6.6K

ikmb/virus-pipe repository overview

⁠IKMB virus-pipe

Pipeline to map and variant call a Sars-CoV2 sample and create a consensus assembly for lineage typing. Optionally, a de-novo assembly can be performed.

⁠Documentation

  1. What happens in this pipeline?⁠
  2. Installation and configuration⁠
  3. Running the pipeline⁠
  4. Pipeline overview⁠
  5. Output⁠

Tag summary

Content type

Image

Digest

sha256:a59214210…

Size

1.3 GB

Last updated

over 3 years ago

docker pull ikmb/virus-pipe

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