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insitulab/junglegenomics

By insitulab

•Updated over 3 years ago

Ubuntu 18.04 with software for analyzing nanopore sequence data.

Image
0

420

insitulab/junglegenomics repository overview

(latest) ~8 gb The image opens into a conda environment called "NGSpeciesID". The following software are available: minibar - NCBI blast suite - NGSpeciesID - qcat - entrez tools - bold_identification [https://github.com/linzhi2013/bold_identification⁠]

External to the NGSpeciesID environment. Use 'conda deactivate' and then run the following software: R version 3.6.1 - Porechop - NanoFilt - NanoPlot - Amplicon_sorter - Seqtk

Tag summary

Content type

Image

Digest

sha256:d2f2e70c6…

Size

3.3 GB

Last updated

over 3 years ago

docker pull insitulab/junglegenomics