A docker container for de novo transcriptome assembly software Bridger.
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A docker container for de novo transcriptome assembly software Bridger.
REF: Bridger: a new framework for de novo transcriptome assembly using RNA-seq data
Example:
$ ls
left.fastq.gz right.fastq.gz
$ docker run -v `pwd`:/data -w /data inutano/bridger:0.1.2 bridger --seqType fq --left /data/left.fastq.gz --right /data/right.fastq.gz --CPU 4
Content type
Image
Digest
Size
257.1 MB
Last updated
over 8 years ago
docker pull inutano/bridger