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isambmi/raids

By isambmi

•Updated 12 months ago

An opinionated implementation of Robust Ancestry Inference using Data Synthesis

Image
Data science
0

259

isambmi/raids repository overview

Only contains the R env and script for running RAIDS

latest/main:

docker run isambmi/raids \
    ~/refs/1000genomes/refGDS/matGeno1000g.gds \
    ~/refs/1000genomes/refGDS/matAnnot1000g.gds \
    ~/refs/hg38/hg38.fai \
    ~/data/input.vcf.gz \
    30

generic:

docker run isambmi/raids:generic \
    ~/refs/1000genomes/refGDS/matGeno1000g.gds \
    ~/refs/1000genomes/refGDS/matAnnot1000g.gds \
    ~/refs/hg38/hg38.fai \
    ~/data/input.csv \
    30

Tag summary

Content type

Image

Digest

sha256:cfdeab668…

Size

1.6 GB

Last updated

12 months ago

docker pull isambmi/raids