jcuhpc/blast-legacy repository overview

Basic local alignment search tool (legacy, unsupported version). Contents of Dockerfile:

FROM ubuntu:18.04 MAINTAINER [email protected]⁠

ENV PACKAGES wget

ENV BLAST_VERSION 2.2.6

WORKDIR /home

RUN apt-get update &&
apt-get upgrade -y &&
useradd -ms /bin/bash luser &&
printf "#!/bin/bash\nexport DEBIAN_FRONTEND=noninteractive\napt-get install -y tzdata\nln -fs /usr/share/zoneinfo/Australia/Brisbane /etc/localtime\ndpkg-reconfigure --frontend noninteractive tzdata\n" >tzinst && chmod 700 tzinst && ./tzinst && rm -f tzinst &&
apt-get install -y ${PACKAGES} &&
cd /usr/local &&
wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy.NOTSUPPORTED/2.2.26/blast-2.2.26-x64-linux.tar.gz &&
tar xf blast-2.2.26-x64-linux.tar.gz && rm -f blast-2.2.26-x64-linux.tar.gz &&
apt-get clean

USER luser WORKDIR /home/luser ENV PATH "$PATH:/usr/local/blast-2.2.26/bin"