jcuhpc/tophat repository overview

A fast splice junction mapper for RNA-Seq reads. Contents of Dockerfile:

FROM ubuntu:18.04 MAINTAINER [email protected]⁠

ENV PACKAGES tophat

ENV TOPHAT_VERSION 2.1.1

WORKDIR /home

RUN apt-get update &&
apt-get upgrade -y &&
useradd -ms /bin/bash luser &&
apt-get install -y ${PACKAGES} &&
apt-get clean

USER luser WORKDIR /home/luser