jfroula/gc_cov repository overview

FROM continuumio/miniconda2
MAINTAINER Jeff Froula <[email protected]>
LABEL version=1.0.0
LABEL description=""

RUN conda install -c conda-forge gnuplot=5.2 && \
    conda install -c anaconda pandas && \
    conda install -c anaconda scipy

# Install bbtools
RUN conda install -c bioconda bbmap==38.68

# supplemental library
RUN apt-get install -y libglu1

COPY bin /app/bin
COPY lib /app/lib

ENV PATH /app/bin:$PATH
ENV PYTHONPATH /app/lib:$PYTHONPATH