The repo holds the image for raw fastq with UMI preprocessing. (fastp, samtools, picard, bwa, fgbio)
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The repo created to hold an image to be used by snakemake --use-singularity
fastp_version=0.23.4 : fastp
samtools_version=1.15.1 : samtools
picard_version=2.27.1 : picard.jar
bwa_version=0.7.17 : bwa
fgbio_version=2.0.1 : fgbio.jar
Content type
Image
Digest
sha256:588c93034…
Size
283.2 MB
Last updated
over 2 years ago
docker pull kandabarau/panel_reads_preprocess:0.0.4