kbieser/leptin-mouse-rnaseq-docker repository overview

⁠leptin-mouse-rnaseq

Docker files and lesson materials for GEA RNA-Seq lesson

⁠To run image locally

1. Get the docker container:

    $ docker pull genomicseducationalliance/rna-seq-leptin:dev_3.0
   

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2. Clone the repository with notebooks

    $ git clone https://github.com/genomics-education-alliance/leptin-mouse-rnaseq.git
   

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3. Example:

    $ docker run --name leptin -d -p 8888:8888 -v /some-absolute-path/:/home/gea_user/ genomicseducationalliance/rna-seq-leptin:dev_3.0
   

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⁠Try it!

Datasets, worked-examples, and notebooks available on CyVerse: /iplant/home/shared/gea/rna-seq-leptin

You can launch a Jupyter lab session pre-loaded with data and notebooks on CyVerse: