khench/genotyping_suite repository overview

⁠Container repository for genotyping_suite

Contains a collection of genotyping tools, specifically gatk, bwa, samtools, bamtools and bcftools.

For the initial building setup, please refer to the accompanying github repository genotyping_suite_build⁠.

⁠usage

To use the container, run for example:

podman run docker.io/khench/genotyping_suite:v0.4 gatk --help