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Last pushed: 4 months ago
Short Description
APRICOT - A tool for sequence-based identification and characterization of protein classes
Full Description

APRICOT is a computational pipeline for the identification of specific functional classes of interest in large protein sets. The pipeline uses efficient sequence-based algorithms and predictive models like signature motifs of protein families for the characterization of user-provided query proteins with specific functional features. The dynamic framework of APRICOT allows the identification of unexplored functional classes of interest in the large protein sets or the entire proteome.

Source code

The source codes of APRICOT are available via git https://github.com/malvikasharan/APRICOT and pypi https://pypi.python.org/pypi/bio-apricot.

Metadata can be seen here: https://microbadger.com/#/images/malvikasharan/apricot

Contact

For question, troubleshooting and requests, please feel free to contact Malvika Sharan at malvika.sharan@uni-wuerzburg.de

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Owner
malvikasharan