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manninglab/vcftogds

By manninglab

•Updated about 5 years ago

Convert vcf to gds in R

Image
0

10K+

manninglab/vcftogds repository overview

⁠vcfToGds - Convert vcf files to gds format

⁠Authors

Tim Majarian⁠

⁠Description

This workflow converts files in Variant Call Format (VCF) to Genomic Data Structure format (GDS).

  • vcf_files: "Array of files, with extensions: .vcf, .vcf.gz, or .vcf.bgz"
  • disk: "Runtime parameter; amount of disk space to provision in gigabytes. Default: 100GB."
  • memory: "Runtime parameter; amount of memory to provision in gigabytes. Default: 20GB."
  • preemptible: "Runtime parameter; whether to use preemptible machines. Default: 0 (no)."

Tag summary

Content type

Image

Digest

Size

1.4 GB

Last updated

about 5 years ago

docker pull manninglab/vcftogds