matblum/idrpred repository overview

⁠IDRPred

This image allows you to run idrpred, an alternative implementation of MobiDB-lite, to predict intrinsically disordered regions in protein sequences.

⁠Example

Download E. coli sequences from Uniprot

curl -o - 'https://rest.uniprot.org/uniprotkb/stream?compressed=true&format=fasta&query=(taxonomy_id:83333)'| gzip -cd > e-coli.fa

Run idrpred

docker run --rm -v $PWD:/data matblum/idrpred:1.0.3 idrpred /data/e-coli.fa /data/e-coli.tsv 

For more information, please refer to the GitHub repository⁠.