mglab2252/simplemicrobiome repository overview

SimpleMicrobiome

SimpleMicrobiome is an integrated web-based platform for streamlined microbiome data analysis and visualization. It allows researchers to perform comprehensive downstream microbiome analyses through an intuitive graphical interface without requiring programming skills.

The platform is specifically designed for wet-lab researchers who need accessible, reproducible, and publication-ready microbiome analysis workflows.

Features Taxonomic composition analysis Alpha diversity analysis Beta diversity analysis Differential abundance analysis Statistical testing and group comparison Machine learning-based classification Microbial association and network analysis Publication-ready figure generation Intended Users Microbiome researchers Clinical microbiome researchers Wet-lab scientists with limited bioinformatics expertise Researchers seeking reproducible microbiome analysis workflows Quick Start

Pull the Docker image:

docker pull mglab2252/simplemicrobiome:v1.0

Run the container:

docker run -d -p 3838:3838 mglab2252/simplemicrobiome:v1.0

Access through web browser:

http://localhost:3838⁠

Available Versions

mglab2252/simplemicrobiome:v1.0

mglab2252/simplemicrobiome:latest