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miguelpmachado/sambamba

By miguelpmachado

•Updated over 5 years ago

High performance tool for working with SAM and BAM files

Image
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miguelpmachado/sambamba repository overview

⁠Sambamba

Docker image for Sambamba⁠.

Sambamba is a high performance highly parallel robust and fast tool (and library), written in the D programming language, for working with SAM and BAM files.

Manual page⁠

Docker file here⁠.

⁠Usage

sambamba --help

⁠Citation

If you are using Sambamba in your research and want to support the future work on Sambamba, please cite the following publication:

A. Tarasov, A. J. Vilella, E. Cuppen, I. J. Nijman, and P. Prins. Sambamba: fast processing of NGS alignment formats. Bioinformatics, 2015

Tag summary

Content type

Image

Digest

Size

73.7 MB

Last updated

over 5 years ago

docker pull miguelpmachado/sambamba