Public Repository

Last pushed: a month ago
Short Description
TraFiC (Transposon Finder in Cancer)
Full Description

TraFiC uses paired-end sequencing data aligned to GRCh37 (hg19) for the identification of somatic insertion of transposable elements

Pull image:
docker pull mobilegenomes/trafic:teiba

Gitlab:
https://gitlab.com/mobilegenomes/TraFiC/

Contact:
mobilegenomes@uvigo.es

What citation should I use for the software TraFiC?
Please use the following reference: Tubio JMC et al. Mobile DNA in cancer. Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes. Science. 2014 Aug 1;345(6196):1251343. doi: 10.1126/science.1251343.

Docker Pull Command
Owner
mobilegenomes