mtangaro/docker-galaxycloud-rna-seq-tools repository overview

⁠docker-galaxycloud-rna-workbench

Docker for rna-workbench

⁠The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy

Authors: Björn A. Grüning, Jörg Fallmann, Dilmurat Yusuf, Sebastian Will, Anika Erxleben, Florian Eggenhofer, Torsten Houwaart, Bérénice Batut, Pavankumar Videm, Andrea Bagnacani, Markus Wolfien, Steffen C. Lott, Youri Hoogstrate, Wolfgang R. Hess, Olaf Wolkenhauer, Steve Hoffmann, Altuna Akalin, Uwe Ohler, Peter F. Stadler and Rolf Backofen

Nucleic Acids Res. 2017 Jul 3; 45(Web Server issue): W560–W566.

⁠Build order

The image groups the following recipes:

- ngs_preprocessing.yml
- rna_seq_tools.yml
- rna_structural_analysis.yml
- rna_workbench.yml
- rna_workbench_2.yml
- rna_workbench_3.yml
- workbench_fix.yml

⁠References

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570170/⁠

http://bgruening.github.io/galaxy-rna-workbench/#docker-configuration⁠

https://github.com/bgruening/galaxy-rna-workbench⁠