Alt-In Tool dockerization. See more detail here: https://github.com/KorkinLab/alt-in-tool
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The ONLY script file you would need to run Docker image is altin_docker.py, accessible via GitHub: https://github.com/KorkinLab/alt-in-tool. The prerequisite is existing Docker installation, the image would be downloaded automatically. You would be able to run example just by executing the following commands:
python3 altin_docker.py -i test/interactors.tsv -o res.txt -f test/diabetes_ensembl_protein.fa test/string_protein.fa
Data is located in 'test' directory. Download would take approximately 10 min on stable internet connection. This is an interface script for Docker container. The ONLY dependency for it is preinstalled Docker with corresponding permissions.
Content type
Image
Digest
Size
2.3 GB
Last updated
over 7 years ago
docker pull narykov/alt-in