Dockerfile source: https://github.com/CCBR/Dockers2/blob/fc64f432c5bb471fc04785c19524099f82379a12/fastqc/ccbr_fastqc_0.11.9/Dockerfile.v1
Built on: 2024-12-02_17:51:09
Build tag: v1
Base image: nciccbr/ccbr_ubuntu_22.04:v4
Dockerfile path in repo: fastqc/ccbr_fastqc_0.11.9/Dockerfile.v1
| Tool | Version |
|---|---|
| bbtools | NOTINDOCKER |
| bcftools | 1.13 using htslib 1.13+ds |
| bedops | 2.4.40 typical |
| bedtools | v2.30.0 |
| bowtie | 1.3.1 |
| bowtie2 | 2.4.4 |
| bwa | 0.7.17-r1188 |
| cutadapt | NOTINDOCKER |
| fastqc | v0.11.9 |
| fastQValidator | NOTINDOCKER |
| fastqscreen | NOTINDOCKER |
| git | 2.34.1 |
| java | 1.8.0_432 |
| kraken2 | NOTINDOCKER |
| kronatools | NOTINDOCKER |
| multiqc | 1.25.1 |
| parallel | 20210822 |
| picard | NOTINDOCKER |
| pigz | 2.6 |
| preseq | NOTINDOCKER |
| python2 | 2.7.18 |
| python3 | 3.10.12 |
| qualimap | NOTINDOCKER |
| rsem | NOTINDOCKER |
| rseqc | NOTINDOCKER |
| samtools | 1.13 |
| ucsc_tools | NOTINDOCKER |
| vcftools | 0.1.16 |
Content type
Image
Digest
Size
331.6 MB
Last updated
over 5 years ago
docker pull nciccbr/ccbr_fastqc_0.11.9