nciccbr/ccbr_python repository overview

## Dockerfile: ccbr_python:v0.0.1   
FROM ubuntu:16.04       
      
RUN mkdir -p /data   
RUN mkdir -p /opt   

RUN apt-get update   
RUN DEBIAN_FRONTEND=noninteractive apt-get install --yes \   
 build-essential \   
 apt-utils \   
 git-all \   
 python \    
 python-pip \   
 wget   

# pip install: numpy, pandas, matplotlib, argparse   
RUN pip install --upgrade pip   
RUN pip install numpy pandas matplotlib argparse   

# pip install snakemake   
RUN DEBIAN_FRONTEND=noninteractive apt-get install --yes \   
  python3 \   
  python3-pip && pip3 install snakemake   

# Set environment variable   
ENV LANG en_US.UTF-8    

WORKDIR /opt   
COPY Dockerfile /opt   

WORKDIR /data