Dockerfile source: https://github.com/CCBR/Dockers2/blob/933f65a418a081dbd9f331a9d97db211c284a397/seurat/sinclair_seurat_5/Dockerfile.v1
Built on: 2025-10-06_15:58:09
Build tag: v1
Base image: nciccbr/ccbr_ubuntu_base_20.04:v7
Dockerfile path in repo: seurat/sinclair_seurat_5/Dockerfile.v1
| Tool | Version |
|---|---|
| bbtools | NOTINDOCKER |
| bcftools | 1.10.2 using htslib 1.10.2-3ubuntu0.1 |
| bedops | 2.4.37 typical |
| bedtools | v2.27.1 |
| bowtie | 1.2.3 |
| bowtie2 | 2.3.5.1 |
| bwa | 0.7.17-r1188 |
| cutadapt | NOTINDOCKER |
| fastqc | NOTINDOCKER |
| fastQValidator | NOTINDOCKER |
| fastqscreen | NOTINDOCKER |
| git | 2.25.1 |
| java | 2025-07-15 |
| kraken2 | NOTINDOCKER |
| kronatools | NOTINDOCKER |
| multiqc | NOTINDOCKER |
| parallel | 20161222 |
| picard | NOTINDOCKER |
| pigz | 2.4 |
| preseq | NOTINDOCKER |
| python2 | 2.7.18 |
| python3 | 3.13.7 |
| qualimap | NOTINDOCKER |
| rsem | NOTINDOCKER |
| rseqc | NOTINDOCKER |
| samtools | 1.10 |
| ucsc_tools | NOTINDOCKER |
| vcftools | 0.1.16 |
Content type
Image
Digest
sha256:f2568ebba…
Size
4.9 GB
Last updated
12 months ago
docker pull nciccbr/sinclair_seurat_5:v1