(unofficial) AlignACE - Aligns Nucleic Acid Conserved Elements
97
website: http://arep.med.harvard.edu/mrnadata/mrnasoft.html
Roth FP, Hughes JD, Estep PW, Church GM. Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation. Nat Biotechnol. 1998;16(10):939-945. doi:10.1038/nbt1098-939
Part of plachta11b diploma. Compatible with rootless singularity with readonly filesystem.
In case of bugs or questions do not hesitate to write mail (short and simple)
FROM plachta11b/emd:0.1 AS emd
# wget http://atlas.med.harvard.edu/download/index.html dead :(
RUN find / -name libstdc++.so \
&& find / -name libgcc_s.so.1
#FROM busybox:1.32.0-glibc
FROM i386/busybox:1.31.1-glibc
COPY --from=emd /packages/EMD/AlignACE /packages/AlignACE
COPY --from=emd /lib/i386-linux-gnu/libstdc++.so.5 /lib/i386-linux-gnu/libstdc++.so.5
COPY --from=emd /lib/i386-linux-gnu/libgcc_s.so.1 /lib/i386-linux-gnu/libgcc_s.so.1
WORKDIR /packages
CMD [ "/packages/AlignACE" ]
Content type
Image
Digest
Size
2.5 MB
Last updated
about 6 years ago
docker pull plachta11b/alignace:0.1