plaquette/panx repository overview

⁠pan-genome-analysis Docker Image

This Dockerfile creates a Docker image for running panX.py, a microbial pan-genome analysis tool from the neherlab/pan-genome-analysis repository⁠.

⁠Features

• Miniconda Installation: Installs Miniconda to manage dependencies via Conda

• Clones the pan-genome-analysis repository with minimal history to save space

• Conda Environment: Sets up the required Conda environment as specified in panX-environment.yml

• Global Accessibility: The panX.py script is globally accessible within the container

⁠Build / Run / Test

look at build_push.sh

⁠Dockerfile⁠